Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEEETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNMFGRETPVEVDFNQIEKL
2OUG Chain:A ((2-156))
--QSWYLLYCKRGQLQRAQEHLERQA---------VNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPA----IVPSAVIHQLSVYK--------------KVIITEGAFEGFQAIFTEPDGE-ARSMLLLNLINKEIKHSVKN------
General information:
TITO was launched using:
RESULT:
Template:
2OUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20582 for 1000 contacts (-20.6/contact) +
2D Compatibility (PS) -15375 + (NN) -6476 + (LL) 2640
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -50543.0 ( -50.54 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_2OUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUG-query.scw
PDB file :
Tito_Scwrl_2OUG.pdb
: