Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEVKKQFPKGFLWGGATAANQVEGAYDVDGKGLSTADMVKFIPKEERTKDLELDVSKAEIEAIIAGKVEGRFPKRDGVDFYHHYKEDIALFAEMGFKTFRLSLNWARIFPNGDDKEPNEKGLEFYDKVFDELLKYDIEPLVTLSHYETPLNLTLKYNGWADRRVIGFFTNYAETVFKRYKNKVKYWLTFNEINVISLSAYTGGGVLLEDAKNPLELSYQAGHHQFVASALATKLAHEIIPGSQVGCMLARMATYPATNNPDDILKAQYENQQN---LFFTDVHARGEYPSFMNRFFQENDIHIVKEVGDDEILKAHTVDFISFSYYMSLSATASPEGDRSAGNLMGGVKNEYLESSDWGWQIDPKGLRWTLNDLYSRYELP-LFIVENGLGAYDTVEEDGKIHDDYRIDYLRKHIEQMKEAIADGVDLMGYTSWGPIDLVSASTSEMSKRYGFIYVDQDDWGKGTLERSRKDSFFWYKKVIETNGEDLD |
1OIM Chain:A ((25-465)) | ----VKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGD--------------TGDV--------ACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEGTGRV-NQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYG--VHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKE-DIRAVRFMHQFNNYPLFLNPIY-RGDYPELVLEFARE---YLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFV-----ERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYVDYS-----TQKRIVKDSGYWYSNVVKNNG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140134 for 3839 contacts (-36.5/contact) +
2D Compatibility (PS) -45800 + (NN) -14135 + (LL) 2624
1D Compatibility (HY) -32800 + (ID) 7700
Total energy: -237945.0 ( -61.98 by residue)
QMean score : 0.495
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