Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFFLDTASVSEIKRISELGLVDGVTTNPTIIAKEGRPFEEVIKEICSIVDGPVSAEV---IGLEADKMVEEA-RILAKWAPN------VVVKIPMTEEGLKAVHTLTAEGIKTNVTLIFTVSQGLMAAKAGATYISPFLGRLDD--------------IGTDGMILIKNLKKVLDNYGLKAEIISASIRHIGHLEEAAEAGAHIATIPGSLFPKLWSHPLTDKGIEGFLKDWEAFSQKEGN
3TK7 Chain:A ((111-280))
--------------------------------------------KILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIKIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQV--IALAGCDALTISPVLLEEL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101553 for 1145 contacts (-88.7/contact) +
2D Compatibility (PS) -15993 + (NN) -3741 + (LL) 4540
1D Compatibility (HY) -12800 + (ID) 2700
Total energy: -132247.0 ( -115.50 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3TK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TK7-query.scw
PDB file :
Tito_Scwrl_3TK7.pdb
: