Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRKLDFSYNNANYNAEFLMKILTTLKDITKVEQFTIEIIDAVPNDQEQFKEEKGLFSKEVFDFNNLVKESHGIKIDFKEITNILKQCRTVWELSMLVVTSENELNDSGKVLCEVELIEGDLFAILYSEDFNIDLFLEKFSTDEITIEG
4DXD Chain:A ((176-257))
-----------------------------------LDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSAL-MGIGVSSGENRAVEAAKKAISSPLLE------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4DXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -999 for 382 contacts (-2.6/contact) +
2D Compatibility (PS) -8527 + (NN) -1428 + (LL) 5136
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -11918.0 ( -31.20 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_4DXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DXD-query.scw
PDB file :
Tito_Scwrl_4DXD.pdb
: