Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNKVIIITGASSGIGKATALLLAEKGAK-------LVLAARRVEKLEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKETEQGMTSLYKQYGITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW
2BD0 Chain:A ((3-238))
-----HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK--CNVRITDVQPGAVYTPMWGKVDDE-----MQALM----MMPEDIAAPVVQAYLQPSRTVVEEIILRPTS---
General information:
TITO was launched using:
RESULT:
Template:
2BD0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142603 for 1891 contacts (-75.4/contact) +
2D Compatibility (PS) -24748 + (NN) -8754 + (LL) 828
1D Compatibility (HY) -14000 + (ID) 3750
Total energy: -193027.0 ( -102.08 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_2BD0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BD0-query.scw
PDB file :
Tito_Scwrl_2BD0.pdb
: