Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTIFPKEQNVTPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKSGMTESEVYAFIWKTFLHIQEIIPS-SRIFYGQETSEN---ADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK |
2DWU Chain:A ((24-78)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVEFLKQ--FPLKALVVACN------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12812 for 223 contacts (-57.5/contact) +
2D Compatibility (PS) -5021 + (NN) -1394 + (LL) 14548
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -7929.0 ( -35.56 by residue)
QMean score : 0.254
|
|
|