Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNE-NHIVHE----CQILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL
2OOL Chain:A ((45-89))
-----------------------------------------------------------LFVVSETDLRIASVSANVEDLLRQP-------PASLLNVPIAHYLTAA------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11687 for 173 contacts (-67.6/contact) +
2D Compatibility (PS) -3508 + (NN) 2553 + (LL) 8376
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -7366.0 ( -42.58 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_2OOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OOL-query.scw
PDB file :
Tito_Scwrl_2OOL.pdb
: