Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMWFRRDLRVNDNKALYHACKED-DLLLLFQVNPAQFITGSPSHQAFFA-----------SVAHFKQEVDKTA-LLQIMFGEPVECLKQLKETLPSWDKVYFNRDETGYGAERDEAAKTFFDEQEIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFKV---------TLKADNIRKENLFPKYEEQFAEMTCD---LPILDSGEKTANTRLANFIKHD--VADYDKARD-FPELDKTSHLSRYLRTGEISVRTIWQAL----QENEATEGRAIFEKELCWRDFYNMIYVSFPNQ---KNEPIQENYRFIEWENNREFFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFIRKYVKELANLPDKFIHQPEKMSEIEQKEYGLLLGKDYPFPLIDHKE----RRKLAIARYEFSKEHYRGNI |
| 1NP7 Chain:A ((7-482)) | -TVLVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQF---AQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINA-KTIYYHREVTQEELDVERNLVKQLTILGIEAKGYWGSTLCHPEDLPFSIQDLPDLFT----KFRKDIEKKKISIRPCFFAPSQLLPSPNIKLELTAPP-PEFFPQINFDHRSVLAFQGGETAGLARLQDYFWHGDRLKDYKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQERVSNDSTHWLIFELLWRDFFRFVAQKYGNKLFNRGGLLNKNF---PWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARD-FRYFNIPKQSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPRPCVNFHQSVEARRKI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85012 for 3544 contacts (-24.0/contact) +
2D Compatibility (PS) -46182 + (NN) -14833 + (LL) 2424
1D Compatibility (HY) -33600 + (ID) 7600
Total energy: -184803.0 ( -52.15 by residue)
QMean score : 0.417
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