Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKKFVSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVNV-------AGVKAKKLKI-AID-----SGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
| 4LSX Chain:A ((83-224)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSNSHINGSVSGFKCSASLTSL--DLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG----ANVVGWVLSDGCGELKHLAISGNKI-----SGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSAL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18123 for 856 contacts (21.2/contact) +
2D Compatibility (PS) -12690 + (NN) 3734 + (LL) 12604
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: 13371.0 ( 15.62 by residue)
QMean score : 0.200
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