Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGEKETSKLLHELKKATNLRQVLDENEAEFKSSEMVTYLKELLAEKKLTKASVIRAARLHETYGYQIFSGVRRPSRDRTIALSFGFKLSGLEASRLLKYTEYPPLYAKNRRDAIIIFALDHGYTLDQTNDSLYDLEEALIETYKEEKPLI
3E4A Chain:A ((809-876))
-----------------------------------------ELFAQ--IISEPAFNTLRTKEQLGYIVFSGPRR--------------ANGIQGLRFIIQSEKPPHYLESRVEAFLI----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3E4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5151 for 351 contacts (-14.7/contact) +
2D Compatibility (PS) -6597 + (NN) -4204 + (LL) 6524
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -13678.0 ( -38.97 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_3E4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E4A-query.scw
PDB file :
Tito_Scwrl_3E4A.pdb
: