Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHENLRELEDQLIELRQTYQEVISETREFEDPQLQNGPINAAEVRLSALRHEIAEVEKKIKKAESKTE
2EFR Chain:A ((163-211))
------YHLENEVARLKKLLERAEERAELSEGK------SAELEEELKTVTNNLKSLEAQA--------
General information:
TITO was launched using:
RESULT:
Template:
2EFR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4082 for 187 contacts (21.8/contact) +
2D Compatibility (PS) -5601 + (NN) -2666 + (LL) 1188
1D Compatibility (HY) -400 + (ID) 350
Total energy: -3747.0 ( -20.04 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2EFR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EFR-query.scw
PDB file :
Tito_Scwrl_2EFR.pdb
: