Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIPDNLLQPVVGKKQVEPKESLAEELVELPFISLLMENSPAPLIKGEADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFV-HIEYQE-----------QTAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
1T5C Chain:A ((102-217)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSH--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29592 for 442 contacts (67.0/contact) +
2D Compatibility (PS) -9500 + (NN) 538 + (LL) 18972
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: 34052.0 ( 77.04 by residue)
QMean score : 0.210
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