Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEGEIPEKYRSVDEEEINRSFGGSLPAVHAVVKSYLQIIWVTKWTE
2JT1 Chain:A ((24-54))
-----------PVKTRDIADAAGLSIYQVRLYLEQLHDVGVL-----
General information:
TITO was launched using:
RESULT:
Template:
2JT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9860 for 157 contacts (-62.8/contact) +
2D Compatibility (PS) -3280 + (NN) -527 + (LL) 1272
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -15445.0 ( -98.38 by residue)
QMean score : 0.172
(partial model without unconserved sides chains):
PDB file :
Tito_2JT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JT1-query.scw
PDB file :
Tito_Scwrl_2JT1.pdb
: