Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWG---DYIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLID----GAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLL-MADNEAGVAVTFSGEAAEMLSENE-DLEYVIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNLGKRMLSYYNELFLEFKMYRK |
| 4EDP Chain:A ((36-290)) | -----------------------------------KLVVSTWGLNEDVLKETVFEPFAKEHGVEIVLDIGNNSERLTKMKNNPNSQIDITYLAESFAEQGVEAGIFDKLDYSKIPNASEMNEKAKSTV---EAGYGPAYTLNSIGIVVDPSAGIEIN--SWEDLWKPELKNKIAIPDITTTNGPAMVEIAAEKAGVDVKTDNG---EAAFKELEALKPNVVKTYSKSSDLANMFSNGEIVAAVASDFAFGTISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKE-------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -107155 for 1913 contacts (-56.0/contact) +
2D Compatibility (PS) -27052 + (NN) -18016 + (LL) 8688
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -157635.0 ( -82.40 by residue)
QMean score : 0.520
|
|
|