Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICE---NQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEY---SNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
3Q5F Chain:A ((11-142))
------DLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQ--LAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAE---PLIAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEHNIME-------------
General information:
TITO was launched using:
RESULT:
Template:
3Q5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26556 for 760 contacts (-34.9/contact) +
2D Compatibility (PS) -13558 + (NN) -4316 + (LL) 1876
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -51454.0 ( -67.70 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_3Q5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q5F-query.scw
PDB file :
Tito_Scwrl_3Q5F.pdb
: