Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTGWHRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNHISLTVFREDWLENL-----TLEATLRIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQ-LQLEGIYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYV---HTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGFHVLVGGELAPIIGRVCMDQTIIKLPR--EFQTGSKVTIIGKDHGNTITADDAAQYLDTINYEVTCLLNERIPRKYIH |
| 4LUS Chain:B ((7-372)) | -------PTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIELRQNGITLP-ILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVKIDS-----GFQPNEESVQ-EIIELNKLEYIDLEGMFTHFATADE---EYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKD-RLELRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNPKVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGE---VTAERIAKDLGTINYEVLCMISRRVDRVYME |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235604 for 2865 contacts (-82.2/contact) +
2D Compatibility (PS) -37350 + (NN) -5857 + (LL) 1364
1D Compatibility (HY) -26800 + (ID) 6400
Total energy: -310647.0 ( -108.43 by residue)
QMean score : 0.559
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