Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTFWQDMM------NFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFLPFIVFVVVNVNAYGLLIGFLISVIAAIAGSLCVFLLARKFGQTRFLRFISG------HKQIKRVMEWIDRHGFSP-------IFILLVMPFTPSSAVNIVAGLSK------IKVYQFILALV--GGKLIKVFAISYIGYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSS------GVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAV----FPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201732 for 1352 contacts (-149.2/contact) +
2D Compatibility (PS) -19910 + (NN) -7501 + (LL) 1136
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -239107.0 ( -176.85 by residue)
QMean score : 0.224
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