Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNLIQMARNKRK
3KL4 Chain:B ((17-36))
---------------------------------GIILVLLIWGTVLLLKSIPH
General information:
TITO was launched using:
RESULT:
Template:
3KL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6401 for 65 contacts (-98.5/contact) +
2D Compatibility (PS) -1869 + (NN) 793 + (LL) 3864
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -7063.0 ( -108.66 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3KL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KL4-query.scw
PDB file :
Tito_Scwrl_3KL4.pdb
: