Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGA--NETI--SEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 2ZF8 Chain:A ((172-260)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTKASKKRLSQIADYIRHNQ----DIDLVLVATY---SASQSLSERRAESLRDYFQSLGLPEDRIQVQGY---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25146 for 313 contacts (-80.3/contact) +
2D Compatibility (PS) -6753 + (NN) -6656 + (LL) 25816
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -16039.0 ( -51.24 by residue)
QMean score : 0.469
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