Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKVLLVDDHEMVRIGVSAYLSVQDDMEVVGEAENGREGADMALELRPDIILMDLVMDEMDGIEATKEIMQNWKEAKIIIVTSFIDDEKVYPALEAGASSYMLKTSTASEIADAIRATYGGDSVLEPEVTGKMMQRLTAKPEKNLHDDLTNRENEILLLIAEGKSNQEIADELFITLKTVKTHVSNILSKLDVQDRTQAAIYAFKHDLVEKK
4HYE Chain:A ((22-211))
-MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRKEYSPE----LMEMVMTRP-----NPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSKLDAGNRTEAA------------
General information:
TITO was launched using:
RESULT:
Template:
4HYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81118 for 1495 contacts (-54.3/contact) +
2D Compatibility (PS) -20637 + (NN) -8514 + (LL) 1856
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -124913.0 ( -83.55 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_4HYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HYE-query.scw
PDB file :
Tito_Scwrl_4HYE.pdb
: