Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDINSY----ICYNGQYVI-FEGKEI-YAKPLPTESLERLITVA-SEHEHPIVFSGKDSMRANLPD---HDRVTIGMNSIKREYPKVDANYYKGRDIYQCLLFCDESYDAYYREEF-----KQYGFLRWHDVSVDVCPADGSKAEGIKQMIKKLGFSMKDTYAFGDGLNDIAMLQTVGTGVAMGNGRDEVKAVADYVTSHVDDDGVYNALKQLKLI |
| 3NIW Chain:A ((6-268)) | --KLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETN---DFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118269 for 2101 contacts (-56.3/contact) +
2D Compatibility (PS) -27444 + (NN) -14742 + (LL) 740
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -181615.0 ( -86.44 by residue)
QMean score : 0.500
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