Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREKNKLDLLHLVEETTNINLHFIRQSKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKTPCAKQLIDQYEKTHSSVIGVQNVPREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLETQEAGSGGEIQLTDAINRLNEIQPVFAYDFEGERF---DVGDKFGFIETTLKFALKHPEIKDDVRDLIIRLGDELK |
| 1MP4 Chain:A ((1-237)) | MKTRKGIILAGGSGTRLYPVTMAVSQQLLPIYDKPMIYYPLSTLMLAGIRDILIISTP---------QDTPRFQQLLGDGSQWGL----------NLQYKVQPSPDGLAQAFIIGEEFIGHDDCALVLGDNIFYGHD-LPKLMEAAVNKESGATVFAYHVNDPE--RYGVVEFDQAGT-----AVSLEEKP--LQPKSNYAVTGLYFYDNSVVEMAKNLKPSARGELEITD-INRIYMEQGRLSVAMMGRGYAHLDTGTHQSLIEAS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88721 for 1933 contacts (-45.9/contact) +
2D Compatibility (PS) -25071 + (NN) -10245 + (LL) 4092
1D Compatibility (HY) -18000 + (ID) 3550
Total energy: -141495.0 ( -73.20 by residue)
QMean score : 0.497
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