Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQGGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYELAESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAIMNEALKYEGYPYVFGG---SSPS---------TSFDCSGLTQWSYAVAGIQLPRVAQAQYDATQHIPLSEAKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAGDPIGYTNLTDSYWQAHLIGAGRIIK |
| 4Q4T Chain:A ((330-447)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPN---GSQ--HVTIYLGNGQMLAAPD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39610 for 721 contacts (-54.9/contact) +
2D Compatibility (PS) -11550 + (NN) -6462 + (LL) 14716
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -52156.0 ( -72.34 by residue)
QMean score : 0.392
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