Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGS--GLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLQKGL
4RBV Chain:A ((9-100))
-QEALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGGSGGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGI
General information:
TITO was launched using:
RESULT:
Template:
4RBV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44088 for 691 contacts (-63.8/contact) +
2D Compatibility (PS) -9830 + (NN) -2323 + (LL) 208
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -70433.0 ( -101.93 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_4RBV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RBV-query.scw
PDB file :
Tito_Scwrl_4RBV.pdb
: