Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFG-ELATLACEKFYFRSSNRAALFVTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVADLKRVAIREVAIEKQEEI
2GSQ Chain:A ((97-146))
----------------------------IFNDVVKIKFAPEAAKEAVQQNYEKSCKRLAPFL---------EGLLVSNGGGDGFFVG---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3520 for 233 contacts (-15.1/contact) +
2D Compatibility (PS) -5251 + (NN) -1363 + (LL) 6084
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -7750.0 ( -33.26 by residue)
QMean score : -0.154
(partial model without unconserved sides chains):
PDB file :
Tito_2GSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GSQ-query.scw
PDB file :
Tito_Scwrl_2GSQ.pdb
: