Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQ-AGYKIIPVNPNADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
2CSU Chain:A ((9-85))
----------------KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDL-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25008 for 379 contacts (-66.0/contact) +
2D Compatibility (PS) -5934 + (NN) 823 + (LL) 6728
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -28391.0 ( -74.91 by residue)
QMean score : 0.722
(partial model without unconserved sides chains):
PDB file :
Tito_2CSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CSU-query.scw
PDB file :
Tito_Scwrl_2CSU.pdb
: