Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIVKSVEACEKAKKKNAIFHQLKMPEQESFYDELIAYVKSLEEPTNG
2HU9 Chain:A ((3-46))
---------RCPECSTEGWRVLPLTVGA----HVKEGLWS-KIKGDFYFCSLESCEVV------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6379 for 231 contacts (-27.6/contact) +
2D Compatibility (PS) -4625 + (NN) -673 + (LL) 3196
1D Compatibility (HY) 0 + (ID) 200
Total energy: -8681.0 ( -37.58 by residue)
QMean score : -0.026
(partial model without unconserved sides chains):
PDB file :
Tito_2HU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HU9-query.scw
PDB file :
Tito_Scwrl_2HU9.pdb
: