Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKL-LQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
3NET Chain:A ((220-282))
---------------------------------------------AKVKLELEKEGINPEQTQKIIDFVKIDGSVDDV---LDKLKHLSQTLPESEQFNLGVSELETVIT-----------
General information:
TITO was launched using:
RESULT:
Template:
3NET.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12410 for 300 contacts (-41.4/contact) +
2D Compatibility (PS) -6433 + (NN) -2196 + (LL) 5472
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -20117.0 ( -67.06 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_3NET.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NET-query.scw
PDB file :
Tito_Scwrl_3NET.pdb
: