Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNERIFRENTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVAEIHRLEEAGCQIVRVACPDERAANALSAIKKKI-----HIPLVADIHFDYRLALK---AIDAGVDKIRINPGNIGR-RDRVE---KVVNAAKAKNIPIRIGVNAGSLEKKIIQ-------KYGYPTA------DGMVESAL-AHIKILE-DLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKSAAGLGAILSLGIGNTLRVSLSADPVE----EIKVAREVLKSFGLSSNAAMLISCPTCGRIEIDLIR-IANEVENYIAKIEVP-----------IKVAVLGCAVNGPGEAREADIGI----AGSNGEGLLFRHGKIIRKVPEAIMIDELKKEIDILAEEFFVKKIDLESLR |
| 4S3A Chain:A ((4-378)) | -----MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGAEVPLVGDFHFNGHLLLRKYPKMAEALD-FRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNARRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPAPGEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRL-KERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161421 for 2593 contacts (-62.3/contact) +
2D Compatibility (PS) -36689 + (NN) -25410 + (LL) 4328
1D Compatibility (HY) -24000 + (ID) 6850
Total energy: -250042.0 ( -96.43 by residue)
QMean score : 0.498
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