Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKLAKKWRDWYIESGKKYLFPLLLVCFAVIAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISDEVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLVSLFMLFIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITIFILLSGATSVVMLRDYSRRSAIMLSGFMVGLINMIYVLLLLLINNSTLLQVSTLMALGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIG----ANSLLVRVGCFYHDIGKTLRPPYFVENQLQGINPHDRLTPEQSRDIIL--SHTKDGAEILKE-NHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD
3TMC Chain:B ((169-260))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSPLNL--NQ-----PLDSMSPE---DLALWKKHPIEGAQKVQDKKHFDQTVINIIGQHEET---------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23977 for 501 contacts (-47.9/contact) +
2D Compatibility (PS) -8995 + (NN) -4935 + (LL) 53276
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: 8969.0 ( 17.90 by residue)
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_3TMC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TMC-query.scw
PDB file : Tito_Scwrl_3TMC.pdb: