Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRTVSKSGTLQESRKREFYEKPSVKRKKKSEAARKRKF
3WZ4 Chain:A ((42-71))
------------AEGWDQFLGALEQSNNLDAVKAKKLVVSAV---------------
General information:
TITO was launched using:
RESULT:
Template:
3WZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4972 for 109 contacts (45.6/contact) +
2D Compatibility (PS) -3353 + (NN) -2312 + (LL) 2388
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -855.0 ( -7.84 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3WZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WZ4-query.scw
PDB file :
Tito_Scwrl_3WZ4.pdb
: