Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN
2D5C Chain:A ((3-261))--RFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKA-GGIPLKGPALVLGAGGAGRAVAFALR-EAGLEVWVWNRTPQRALALAEEFG-LRAVPLEKAREA----RLLVNATRVGLE-DPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAARRAL---


General information:
TITO was launched using:
RESULT:

Template: 2D5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101120 for 2379 contacts (-42.5/contact) +
2D Compatibility (PS) -28153 + (NN) -12220 + (LL) 380
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -164413.0 ( -69.11 by residue)
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_2D5C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D5C-query.scw
PDB file : Tito_Scwrl_2D5C.pdb: