Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPIVVGVTGGSGSGKTSVTKAICNHFSGHSI-------LMIAQDVYYHDQANISFEDRLKV-----NYDHPLAFDTDLLISHIAALRRYESIEKPIYDYAKYTRKKEVEIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV
2JEO Chain:A ((22-232))
---RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFY---KVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVR----DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILN---
General information:
TITO was launched using:
RESULT:
Template:
2JEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99594 for 1484 contacts (-67.1/contact) +
2D Compatibility (PS) -21092 + (NN) -8980 + (LL) 844
1D Compatibility (HY) -20400 + (ID) 3700
Total energy: -152922.0 ( -103.05 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2JEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JEO-query.scw
PDB file :
Tito_Scwrl_2JEO.pdb
: