Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQESYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVG----ADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGY------YP-------DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ |
2IH4 Chain:A ((22-185)) | -----------------------------------------------------------------------------------------------ETPPEVVDFMVS-----LAEAPRGGRVLEPACAHGPFLRAF---REAHGTA-YRFVGVEIDPKALDLPPWAEGILADF------LLWEPGEA------FDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFL--EKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102832 for 1108 contacts (-92.8/contact) +
2D Compatibility (PS) -15373 + (NN) -3553 + (LL) 15848
1D Compatibility (HY) -13600 + (ID) 2250
Total energy: -121760.0 ( -109.89 by residue)
QMean score : 0.459
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