Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQ----NRG---KHIITSSIEHPSVRVVMEEL-EQEGFTVKYLPVDK-NGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLEN---------TFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKR---KNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEA-LIEIRDYLLTKI-AQMSDMTVHTKQSVAA----PHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQ-KLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK |
| 3GZC Chain:A ((27-436)) | -VYMDYNATTPLEPEVIQAMTKAMWEAWGNPSSPYSAGRKAKDIINAARESLAKMIGGKPQDIIFTSGGTESNNLVIHSVVKHFHANQT---GAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIRGLGEFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143299 for 3259 contacts (-44.0/contact) +
2D Compatibility (PS) -40772 + (NN) -21558 + (LL) 316
1D Compatibility (HY) -18800 + (ID) 6500
Total energy: -230613.0 ( -70.76 by residue)
QMean score : 0.517
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