Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQFNAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAENED-FSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAAI
2GZY Chain:A ((9-100))
-------QSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVG--FKPKEALQELV---
General information:
TITO was launched using:
RESULT:
Template:
2GZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55282 for 635 contacts (-87.1/contact) +
2D Compatibility (PS) -9568 + (NN) -1040 + (LL) 1116
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -73974.0 ( -116.49 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2GZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZY-query.scw
PDB file :
Tito_Scwrl_2GZY.pdb
: