Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLIDNYDSFTFNLEQYLAEFSEVVVKRNDAADLIKIAALADGIVLSPGPGKPSDAGLLEEVVAKFAKEK-PLLGICLGHQAIGEVFGGEVKRAAKIRHGKVSTMRQTAGAIFANLPEEMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYPVYGLQFHPE-SIGTNDGKQMMENFIHIVEGARENGNLTTKSI
1T36 Chain:B ((218-379))
------------------------IVPAQTSAEDVLKMNP--DGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVV------MITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRK---------
General information:
TITO was launched using:
RESULT:
Template:
1T36.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73159 for 1260 contacts (-58.1/contact) +
2D Compatibility (PS) -16881 + (NN) -3290 + (LL) 2976
1D Compatibility (HY) -6000 + (ID) 2450
Total energy: -98804.0 ( -78.42 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_1T36.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T36-query.scw
PDB file :
Tito_Scwrl_1T36.pdb
: