Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFS-MEKGLDYVMESFSDCLLQKE--PFALKESATWSDD--EWYLDQENRNFIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIED---DFMTIPETFDRDLESLLSQPGA-DEIEGMVIGRFQQKTAMTAEKLAY-IIETKTALQKIPVISGADFGHTQPIATFPIGGTARID-TNQTDKIQIIRH |
| 4MI1 Chain:A ((6-327)) | -LPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTN-GQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSF-----SFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPMITMPIGVQVKMDATNKT-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200946 for 2685 contacts (-74.8/contact) +
2D Compatibility (PS) -32049 + (NN) -4838 + (LL) 1144
1D Compatibility (HY) -22000 + (ID) 5650
Total energy: -264339.0 ( -98.45 by residue)
QMean score : 0.502
|
|
|