Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIAIFASGSGSNFQALVD---DEFIKPYVKLLVCDKPNAYVLERANKHDIPVFLFEAKNYPDKEAFETEILLELRRLEIDLLVLAGYMRLIGPTLLAEFPEQIVNLHPSLLPEFKGKDAIGQAIQANVSGTGVTAHFVDAGMDTGPIIDQVKVTIETAETTDTLAEKIHQVEHIFYPKVIRGLIQNGGND
1JKX Chain:A ((1-181))
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVI----------
General information:
TITO was launched using:
RESULT:
Template:
1JKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160273 for 1410 contacts (-113.7/contact) +
2D Compatibility (PS) -19653 + (NN) -13579 + (LL) -152
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -211157.0 ( -149.76 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1JKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JKX-query.scw
PDB file :
Tito_Scwrl_1JKX.pdb
: