Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKPII-ALDFQTYEEVETFLAKFSGETLSVKVGMELFYSNGPVIVEKIKQQNHEIFLDLKLHDIPNTVKSAMIGLAKLGVDMVNVHAAGGKKMMEAAKEGLEIGSPSGK-RPKIIAVTQLTSTSETDMQTEQLIKTSLLESVMHYSNLSKQAGLDGVVCSALEAEDIKQQNGADFLRVTPGIRLASDTADDQIRVVTPEKARLIGSSNIVVGRSITRANDPVAAYNQVLKEWNA
1JJK Chain:A ((14-239))-NSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREAL---VPFGKDAPLLIAVTVLTSMEASDL-VDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPA----QTLKAINA


General information:
TITO was launched using:
RESULT:

Template: 1JJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -89184 for 1883 contacts (-47.4/contact) +
2D Compatibility (PS) -24560 + (NN) -10721 + (LL) 764
1D Compatibility (HY) -13200 + (ID) 5100
Total energy: -142001.0 ( -75.41 by residue)
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_1JJK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JJK-query.scw
PDB file : Tito_Scwrl_1JJK.pdb: