Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLH-VADGIVVSSVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSSEQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKEKEMTRGR |
| 2KSB Chain:A ((113-161)) | ---------------------------------------------------------------IAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32266 for 236 contacts (-136.7/contact) +
2D Compatibility (PS) -4542 + (NN) -72 + (LL) 26372
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -17858.0 ( -75.67 by residue)
QMean score : -0.050
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