Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQLKVENLTKTYGEKSLFENISLTITEGERIGLIGVNGTGKSTLLQIISGSESGDKGTVTKAKDYTIGYLAQDPAF--NEEDTVLAAVFDGDTAALRAMRKYEEV-LLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAKISALSGGQRKRVGLAQVLIETPDLLILDEPTNHLDFQ-------SIRWLEEYLNRFKG-AVLLVTHDRYFLDRVTN--HMVELDRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGPQGRATKQNARQDRFHDLEKKVKIKTDDSELAIDFVTS--RLGKDVFELKNLEKRFDEKQVLQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNEEMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERF----LFPP----NSHGKKIGSLSGGEKRRLFLLRILMERPNVLLLDEPTNDLDT-QTLTV---LEDYLESFNGTVITVSHDRYFLDKVVNKLLVFRAIGEVEIFYGEYSDYLKELEAKGKPAKSMKKMANTSVEKSSPEKKEKVKLTYQEQLEWDGIEDAISKLEKDIESLNETLEQTGADFTKAAEISGFITAKETELEQMMERWEFLSQYAE |
| 1YQT Chain:A ((25-475)) | ------EDCVHRYGVNAFVLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIR------AFRGNELQNYFEKLKNGE---IRPVVKPQYVDLIPKAVKGKVIELLKKADETGKLEEVVKALEL----ENVLER--------EIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSE-----EGKSVLVVEHDLAVLDYLSDIIHVV-------YGEPGVYGIFSQPKGTR--NGINE-------------FLR----GYLKDENVR---FRPYEIKFTKTGERVEIERETLVTYPRLVKDYGSFR-LEVEPGE----------IKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLTVA---YKPQYIKADYEGTVYELLSK------------IDASKLNSNFYKTELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLMVF----------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -99579 for 3342 contacts (-29.8/contact) +
2D Compatibility (PS) -45227 + (NN) -15047 + (LL) 15196
1D Compatibility (HY) -30000 + (ID) 6900
Total energy: -181557.0 ( -54.33 by residue)
QMean score : 0.281
|
|
|