Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGKQVMVGGLSLLLVGAGLGAFGSTAQAATDDASVMPDISNKQVLVGYWHSWKSSGKDGYQQGTSADIALKDTPKAYNVVDVSFMKGDGVNRIPTFKPVGINDSDFRAQVGALNKEGRAVLLALGGADGHVEL-KAGDEEAFANEIIRQVETYGFDGLDIDLEQSAITAGDNKTV----------IPAALKIVKDHYKAEGKNFLITMAPEFPYLKPG-SAYES----YLTSLANYYD---YIAPQLYNQG-GDGVWVDETNQWIAQNNDTLKESFLYYMADSFINGTRGYLKIPANKFVFGLPANVDAAATGYVTDPQIVKNVFTRLQAKGTP---------------VKGIMTWSVNWDAGKNKAGVPYNNSFSNAYGPIVGTK |
| 3N15 Chain:A ((7-322)) | -------------------------------------------KLLVGYWHN--------FDNGTGI-IKLKDVSPKWDVINVSFGETGGDRSTVEFSPVYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDGIDIDLQSGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHY---GPDFLLSMAPETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIGMDGNNYNQGTADYEVAMADMLLHGFPVGG-NANNIFPALRSDQVMIGLPAAPAAAPSGGYISPTEMKKALNYI-IKGVPFGGKYKLSNQSGYPAFRGLMSWSINWDA-KN------NFEFSNNY------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3N15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122326 for 2319 contacts (-52.7/contact) +
2D Compatibility (PS) -29662 + (NN) -11725 + (LL) 2504
1D Compatibility (HY) -21600 + (ID) 5250
Total energy: -188059.0 ( -81.09 by residue)
QMean score : 0.480
|
|
|