Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLITNKQGLVGAITVPGDKSMSHRSIMFGAIAEGKTVIRHFLRADDCLGTIKAFKALGVKIEETDEEIIVHGTGFDGLKQADGPLDIGNSGTTIRLMMGILAGRDFDTVILGDESIAKRPMNRVMLPLQQMGAKMHGKDGSEFAPITITGKQSLKRMEYHMPVASAQVKSAIIFAALQAEGETIIHEKEKTRDHTEHMIRQFGG----EIEMDGL-TIRVKGGQKFTGQEMTVPGDVSSAAFFIVAGLITPGSEIELTHVGLNPTRTGIFDVVKQMGGSLVVKDSSRSTGKLAGTVVVKTSKLKGTEIDGDIIPRLIDEIPVIALLATQAEGTTIIKDAAELKVKETNRIDAVATELNKMGADITPTEDGLIIHGKT------PLHAANVTSYGDHRIGMMLQIAALLVEEGDVELERPEAVSVSYPTFFEDIRSLLK |
| 2PQD Chain:A ((10-433)) | ------SSGLSGTVRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGKAMQAMGARIRKEGDTWIIDGVGNGGLLAPEAPLDFGNAGTGCRLTMGLVGVYDFDSTFIGDASLTKRPMGRVLNPLREMGVQVKSEDGDRL-PVTLRGPKTPTPITYRVPMASAQVKSAVLLAGLNTPGITTVIEPIMTRDHTEKMLQGFGANLTVETDADGVRTIRLEGRGKLTGQVIDVPGDPSSTAFPLVAALLVPGSDVTILNVLMNPTRTGLILTLQEMGADIEVINPRLAGGEDVADLRVRSSTLKGVTVPEDRAPSMIDEYPILAVAAAFAEGATVMNGLEELRVKESDRLSAVANGLKLNGVDCDEGETSLVVRGRPDGKGLGNASGAAVATHLDHRIAMSFLVMG-LVSENPVTVDDATMIATSFPEFMD------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242664 for 3891 contacts (-62.4/contact) +
2D Compatibility (PS) -44143 + (NN) -13854 + (LL) 1560
1D Compatibility (HY) -32800 + (ID) 8500
Total energy: -340401.0 ( -87.48 by residue)
QMean score : 0.553
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