Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
1S59 Chain:A ((5-151))
VEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWL
General information:
TITO was launched using:
RESULT:
Template:
1S59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65740 for 1126 contacts (-58.4/contact) +
2D Compatibility (PS) -15699 + (NN) -3808 + (LL) 0
1D Compatibility (HY) -18400 + (ID) 3950
Total energy: -107597.0 ( -95.56 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_1S59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S59-query.scw
PDB file :
Tito_Scwrl_1S59.pdb
: