Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ
3O4X Chain:E ((1108-1167))
------------------------------------------------------------------------------------------------------------------------DPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKRE-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3O4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18887 for 234 contacts (80.7/contact) +
2D Compatibility (PS) -7475 + (NN) -10446 + (LL) 11536
1D Compatibility (HY) -400 + (ID) 850
Total energy: 11252.0 ( 48.09 by residue)
QMean score : 1.201
(partial model without unconserved sides chains):
PDB file :
Tito_3O4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O4X-query.scw
PDB file :
Tito_Scwrl_3O4X.pdb
: