Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAIKVESLTKNYHKKRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDVVKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAKFHHIENATQKMN-----KYYEMFSIDPKKRFGEMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQ---HYLFKEMTERNKEGMTIFLSSHNLREVQEYCTRAAFIRNGNIIAV---EDIANQQMTGKVIALKGTNLPLEKLTNAGARIIEKEMGKARLIFDDDIKTILPLLQEKEITDLTITNQELEDKFMTLYEGGEIK |
3D31 Chain:A ((2-248)) | ---IEIESLSRKW-KNFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE-KHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLT----LSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNK--LTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEKPVEGRVASFVGFENVLK------GRVISAEQGLLRI------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -117654 for 1762 contacts (-66.8/contact) +
2D Compatibility (PS) -24113 + (NN) -572 + (LL) 4264
1D Compatibility (HY) -17600 + (ID) 3400
Total energy: -159075.0 ( -90.28 by residue)
QMean score : 0.376
|
|
|