Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKRSLSLENI-KTVMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFTGNPRASEVVGVDSEGALEAYGLVSGKPTVLVFGGSRGARGVNEAVEAVLPEWNNR---DFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
| 1F0K Chain:A ((7-352)) | KRLMVMAGGTGGHVFPGLAVAHHLMAQG--WQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKG-IKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGA-----FPNAEVVGNPVRTDVLALPLP-QQRLAGREG-PVRVLVVGGSQGA----RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQ-PQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHK-DRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAG-WS-RETLLTMAERARAASIPDATERVANEVSR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200270 for 3074 contacts (-65.1/contact) +
2D Compatibility (PS) -37668 + (NN) -15694 + (LL) 260
1D Compatibility (HY) -18800 + (ID) 5250
Total energy: -277422.0 ( -90.25 by residue)
QMean score : 0.630
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