Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VGGLMKKNTLILGIESSCDETAASVVKNGNEIISSVVASQIESHKRFGGVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGVAVTEGPGLVGALLIGVNAAKTLAFMHNLPLVGVHHIAGHIYANRFETEFKFPLLSLVVSGGHTELVLMKADNEFEIIGETRDDAAGEAYDKVARTLGLAYPGGVQIDKLAKDGEDTFHFPRAMMDEGSFDFSFSGLKSSFINTLHNLRQRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQYDVKQLLLAGGVAANQGLRERLIQEVKLELPETELIIPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPGLLLEDI |
| 2VWB Chain:A ((2-306)) | ---------ICLGLEGTAEKTGVGIVTSDGEVLFN---KTIM-----------EAADHHAETFPKLIKEAFEV--VDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQ-VIAYVSKKYRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTV---KGMDIAFSGLLTAAMRA-YDAGERLE-----DICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREML--KAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSLD------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169852 for 2615 contacts (-65.0/contact) +
2D Compatibility (PS) -31492 + (NN) -12145 + (LL) 2632
1D Compatibility (HY) -17600 + (ID) 4950
Total energy: -233407.0 ( -89.26 by residue)
QMean score : 0.484
|
|
|