Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRK-ADPEKMKTILRLPVS |
1R8E Chain:A ((122-277)) | -------------------GEVFVLDEEEIRIIQTEAEGIGPENVLNASYSKLKKFIESADGFTNN--------------SYGATFSFQPYT-SIDEMTYRHIFTPVLTNKQI---------------SSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYIADRQLTVV----SDVYELIIPIHYSPKKQEEYRVEMKIRIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10460 for 1081 contacts (-9.7/contact) +
2D Compatibility (PS) -16763 + (NN) -6895 + (LL) 4028
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -33040.0 ( -30.56 by residue)
QMean score : 0.342
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